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Lanthanum in PDB 9c8x: X-Ray Crystal Structure of Methylorubrum Extorquens La(III)-Bound Land

Protein crystallography data

The structure of X-Ray Crystal Structure of Methylorubrum Extorquens La(III)-Bound Land, PDB code: 9c8x was solved by J.J.Jung, C.-Y.Lin, A.K.Boal, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.86 / 1.90
Space group I 21 3
Cell size a, b, c (Å), α, β, γ (°) 77.71, 77.71, 77.71, 90, 90, 90
R / Rfree (%) 21.5 / 25.5

Lanthanum Binding Sites:

The binding sites of Lanthanum atom in the X-Ray Crystal Structure of Methylorubrum Extorquens La(III)-Bound Land (pdb code 9c8x). This binding sites where shown within 5.0 Angstroms radius around Lanthanum atom.
In total only one binding site of Lanthanum was determined in the X-Ray Crystal Structure of Methylorubrum Extorquens La(III)-Bound Land, PDB code: 9c8x:

Lanthanum binding site 1 out of 1 in 9c8x

Go back to Lanthanum Binding Sites List in 9c8x
Lanthanum binding site 1 out of 1 in the X-Ray Crystal Structure of Methylorubrum Extorquens La(III)-Bound Land


Mono view


Stereo pair view

A full contact list of Lanthanum with other atoms in the La binding site number 1 of X-Ray Crystal Structure of Methylorubrum Extorquens La(III)-Bound Land within 5.0Å range:
probe atom residue distance (Å) B Occ
A:La101

b:14.8
occ:0.50
OE2 A:GLU75 2.5 18.6 1.0
OE1 A:GLU73 2.6 12.1 1.0
OE2 A:GLU70 2.6 11.5 1.0
OE1 A:GLU70 2.7 11.7 1.0
CD A:GLU70 3.0 11.6 1.0
O A:HOH202 3.0 28.1 0.5
CD A:GLU75 3.5 14.3 1.0
CD A:GLU73 3.7 12.6 1.0
OE1 A:GLU75 4.0 14.8 1.0
OE2 A:GLU73 4.2 12.6 1.0
CG A:GLU70 4.5 11.7 1.0
CG A:GLU75 4.5 14.8 1.0
NH2 A:ARG69 4.8 10.9 1.0
NE A:ARG69 4.9 12.1 1.0
CG A:GLU73 5.0 13.5 1.0

Reference:

W.B.Larrinaga, J.J.Jung, C.-Y.Lin, A.K.Boal, J.A.Cotruvo. Modulating Metal-Centered Dimerization of A Lanthanide Chaperone Protein For Separation of Light Lanthanides To Be Published.
Page generated: Sat Aug 9 19:56:05 2025

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